Module 3. Phylogenetics

Module 3: Phylogenetics

Welcome to Module 3: Phylogenetics!

When	What
Aug 27	Day 6: Introduction to statistical phylogenetics
Aug 28	Day 7: Dating tree using fossilised birth-death process, model adequacy

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Day 6

Slides

• Introduction to statistical phylogenetics

Exercises

• Exercise 1: Parsimony
• Exercise 2: Likelihood
• Exercise 3: the Rev language
• Exercise 4: Bayesian tree inference using RevBayes

Day 7

Slides

• Phylogenetic dating
• Morphological data

Exercises

• Exercise 5: Simulating under the FBD process
• Exercise 6: Inference under the FBD process
• Exercise 7: Tree inference using morphology
• Exercise 8: Model adequacy